Bioconductor Ql f-test

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EdgeR glmlrt() ql f-test

8.5 years ago • updated 7.8 years ago elineverbon ▴ 20

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edger paired samples glm QL F-test LR-test

written 8.7 years ago by Akira Imamoto • 0

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Comment: DESeq2 with proteomics data by wook2014 • 0

You may need to do NA imputation before give the data to DEseq2 and there are study on DEseq2 performance on proteomics data, like :https:/…

Answer: Unable to install a forged BSgenome package by James W. MacDonald 68k

Add a repos = NULL to `install.packages`. You may also need to either move the file to a dir that doesn't have a space in the name or you […

Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by James W. MacDonald 68k

Have you figured out how to do this using tidy grammar? Using non-tidy grammar is quite simple, and perhaps you already know how to do that…

Comment: How can I correctly use phyloseq with Docker? by James W. MacDonald 68k

You can use [bioc-run][1] to simplify things as well. [1]: https://github.com/Bioconductor/bioc-run/tree/devel

Comment: How can I correctly use phyloseq with Docker? by James W. MacDonald 68k

You show how you modified the container, but not how you are running it, which is the critical part.

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How to combine two DESeq2 objects (dds) for analysis

How can I correctly use phyloseq with Docker?

Comment: Filtering after DESeq

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Popular Question to caroline.zanchi • 0